Monitor KubeDB managed MySQL With Datadog in Google Kubernetes Engine (GKE)

Introduction

KubeDB is the Kubernetes Native Database Management Solution which simplifies and automates routine database tasks such as Provisioning, Monitoring, Upgrading, Patching, Scaling, Volume Expansion, Backup, Recovery, Failure detection, and Repair for various popular databases on private and public clouds. The databases that KubeDB supports are Redis, PostgreSQL, Kafka, MySQL, MongoDB, MariaDB, Elasticsearch, ProxySQL, Percona XtraDB, Memcached and PgBouncer. You can find the guides to all the supported databases in KubeDB . In this tutorial we will Monitor MySQL With Datadog in Google Kubernetes Engine (GKE) Using KubeDB. We will cover the following steps:

  1. Install KubeDB
  2. Install Datadog
  3. Deploy MySQL Cluster
  4. Read/Write Sample Data
  5. Monitor MySQL with Datadog

Get Cluster ID

We need the cluster ID to get the KubeDB License. To get cluster ID we can run the following command:

$ kubectl get ns kube-system -o jsonpath='{.metadata.uid}'
6c08dcb8-8440-4388-849f-1f2b590b731e

Get License

Go to Appscode License Server to get the license.txt file. For this tutorial, we will use KubeDB Enterprise Edition.

License Server

Install KubeDB

We will use helm to install KubeDB. Please install Helm if it is not already installed. Now, let’s install KubeDB.

$ helm repo add appscode https://charts.appscode.com/stable/
$ helm repo update

$ helm search repo appscode/kubedb
NAME                              	CHART VERSION	APP VERSION	DESCRIPTION                                       
appscode/kubedb                   	v2023.08.18  	v2023.08.18	KubeDB by AppsCode - Production ready databases...
appscode/kubedb-autoscaler        	v0.20.0      	v0.20.1    	KubeDB Autoscaler by AppsCode - Autoscale KubeD...
appscode/kubedb-catalog           	v2023.08.18  	v2023.08.18	KubeDB Catalog by AppsCode - Catalog for databa...
appscode/kubedb-community         	v0.24.2      	v0.24.2    	KubeDB Community by AppsCode - Community featur...
appscode/kubedb-crds              	v2023.08.18  	v2023.08.18	KubeDB Custom Resource Definitions                
appscode/kubedb-dashboard         	v0.11.0      	v0.11.0    	KubeDB Dashboard by AppsCode                      
appscode/kubedb-enterprise        	v0.11.2      	v0.11.2    	KubeDB Enterprise by AppsCode - Enterprise feat...
appscode/kubedb-grafana-dashboards	v2023.08.18  	v2023.08.18	A Helm chart for kubedb-grafana-dashboards by A...
appscode/kubedb-metrics           	v2023.08.18  	v2023.08.18	KubeDB State Metrics                              
appscode/kubedb-one               	v2023.08.18  	v2023.08.18	KubeDB and Stash by AppsCode - Production ready...
appscode/kubedb-ops-manager       	v0.22.0      	v0.22.8    	KubeDB Ops Manager by AppsCode - Enterprise fea...
appscode/kubedb-opscenter         	v2023.08.18  	v2023.08.18	KubeDB Opscenter by AppsCode                      
appscode/kubedb-provisioner       	v0.35.0      	v0.35.6    	KubeDB Provisioner by AppsCode - Community feat...
appscode/kubedb-schema-manager    	v0.11.0      	v0.11.0    	KubeDB Schema Manager by AppsCode                 
appscode/kubedb-ui                	v2023.03.23  	0.4.3      	A Helm chart for Kubernetes                       
appscode/kubedb-ui-server         	v2021.12.21  	v2021.12.21	A Helm chart for kubedb-ui-server by AppsCode     
appscode/kubedb-webhook-server    	v0.11.0      	v0.11.1    	KubeDB Webhook Server by AppsCode   

# Install KubeDB Enterprise operator chart
$ helm install kubedb appscode/kubedb \
  --version v2023.08.18 \
  --namespace kubedb --create-namespace \
  --set kubedb-provisioner.enabled=true \
  --set kubedb-ops-manager.enabled=true \
  --set kubedb-autoscaler.enabled=true \
  --set kubedb-dashboard.enabled=true \
  --set kubedb-schema-manager.enabled=true \
  --set-file global.license=/path/to/the/license.txt

Let’s verify the installation:

$ watch kubectl get pods --all-namespaces -l "app.kubernetes.io/instance=kubedb"

NAMESPACE   NAME                                            READY   STATUS    RESTARTS   AGE
kubedb      kubedb-kubedb-autoscaler-57b9d979ff-grz6d       1/1     Running   0          71s
kubedb      kubedb-kubedb-dashboard-567859b978-8jc45        1/1     Running   0          71s
kubedb      kubedb-kubedb-ops-manager-954c4c6c8-s4s5q       1/1     Running   0          70s
kubedb      kubedb-kubedb-provisioner-56bdb59696-bkn7w      1/1     Running   0          71s
kubedb      kubedb-kubedb-schema-manager-658b6db6dc-2pcq6   1/1     Running   0          71s
kubedb      kubedb-kubedb-webhook-server-7f98695cb5-s49wq   1/1     Running   0          71s

We can list the CRD Groups that have been registered by the operator by running the following command:

$ kubectl get crd -l app.kubernetes.io/name=kubedb
NAME                                              CREATED AT
elasticsearchautoscalers.autoscaling.kubedb.com   2023-10-06T04:44:17Z
elasticsearchdashboards.dashboard.kubedb.com      2023-10-06T04:44:18Z
elasticsearches.kubedb.com                        2023-10-06T04:44:19Z
elasticsearchopsrequests.ops.kubedb.com           2023-10-06T04:44:25Z
elasticsearchversions.catalog.kubedb.com          2023-10-06T04:41:41Z
etcds.kubedb.com                                  2023-10-06T04:44:25Z
etcdversions.catalog.kubedb.com                   2023-10-06T04:41:41Z
kafkas.kubedb.com                                 2023-10-06T04:44:52Z
kafkaversions.catalog.kubedb.com                  2023-10-06T04:41:42Z
mariadbautoscalers.autoscaling.kubedb.com         2023-10-06T04:44:18Z
mariadbdatabases.schema.kubedb.com                2023-10-06T04:44:26Z
mariadbopsrequests.ops.kubedb.com                 2023-10-06T04:45:01Z
mariadbs.kubedb.com                               2023-10-06T04:44:26Z
mariadbversions.catalog.kubedb.com                2023-10-06T04:41:42Z
memcacheds.kubedb.com                             2023-10-06T04:44:26Z
memcachedversions.catalog.kubedb.com              2023-10-06T04:41:42Z
mongodbautoscalers.autoscaling.kubedb.com         2023-10-06T04:44:18Z
mongodbdatabases.schema.kubedb.com                2023-10-06T04:44:20Z
mongodbopsrequests.ops.kubedb.com                 2023-10-06T04:44:29Z
mongodbs.kubedb.com                               2023-10-06T04:44:21Z
mongodbversions.catalog.kubedb.com                2023-10-06T04:41:42Z
mysqlautoscalers.autoscaling.kubedb.com           2023-10-06T04:44:19Z
mysqldatabases.schema.kubedb.com                  2023-10-06T04:44:17Z
mysqlopsrequests.ops.kubedb.com                   2023-10-06T04:44:58Z
mysqls.kubedb.com                                 2023-10-06T04:44:18Z
mysqlversions.catalog.kubedb.com                  2023-10-06T04:41:43Z
perconaxtradbautoscalers.autoscaling.kubedb.com   2023-10-06T04:44:19Z
perconaxtradbopsrequests.ops.kubedb.com           2023-10-06T04:45:15Z
perconaxtradbs.kubedb.com                         2023-10-06T04:44:46Z
perconaxtradbversions.catalog.kubedb.com          2023-10-06T04:41:43Z
pgbouncers.kubedb.com                             2023-10-06T04:44:47Z
pgbouncerversions.catalog.kubedb.com              2023-10-06T04:41:44Z
postgresautoscalers.autoscaling.kubedb.com        2023-10-06T04:44:19Z
postgresdatabases.schema.kubedb.com               2023-10-06T04:44:24Z
postgreses.kubedb.com                             2023-10-06T04:44:25Z
postgresopsrequests.ops.kubedb.com                2023-10-06T04:45:09Z
postgresversions.catalog.kubedb.com               2023-10-06T04:41:44Z
proxysqlautoscalers.autoscaling.kubedb.com        2023-10-06T04:44:20Z
proxysqlopsrequests.ops.kubedb.com                2023-10-06T04:45:12Z
proxysqls.kubedb.com                              2023-10-06T04:44:50Z
proxysqlversions.catalog.kubedb.com               2023-10-06T04:41:44Z
publishers.postgres.kubedb.com                    2023-10-06T04:45:26Z
redisautoscalers.autoscaling.kubedb.com           2023-10-06T04:44:21Z
redises.kubedb.com                                2023-10-06T04:44:50Z
redisopsrequests.ops.kubedb.com                   2023-10-06T04:45:05Z
redissentinelautoscalers.autoscaling.kubedb.com   2023-10-06T04:44:21Z
redissentinelopsrequests.ops.kubedb.com           2023-10-06T04:45:19Z
redissentinels.kubedb.com                         2023-10-06T04:44:51Z
redisversions.catalog.kubedb.com                  2023-10-06T04:41:45Z
subscribers.postgres.kubedb.com                   2023-10-06T04:45:29Z

Install Datadog

To install Datadog, we recommend using Helm. Below are the steps for the installation. For more installation options and details, visit Datadog’s official documentation .

$ helm repo add datadog https://helm.datadoghq.com
$ helm repo update
$ helm install datadog --set datadog.site='datadoghq.com' --set datadog.apiKey=<YOUR DATADOG API KEY> --set datadog.apm.enabled=true datadog/datadog

Let’s verify the installation:

$ kubectl get pods --all-namespaces -l "app.kubernetes.io/instance=datadog"

NAMESPACE   NAME                                     READY   STATUS    RESTARTS   AGE
default     datadog-bkbkg                            3/3     Running   0          87s
default     datadog-cluster-agent-5c9946d8d7-8kfpp   1/1     Running   0          86s
default     datadog-cx6c8                            3/3     Running   0          86s
default     datadog-hf5s6                            3/3     Running   0          86s
default     datadog-nw5vq                            3/3     Running   0          86s
default     datadog-r6pjd                            3/3     Running   0          86s
default     datadog-w8bjp                            3/3     Running   0          86s

Datadog Events

To view events from your Kubernetes cluster, go to Datadog’s Event Explorer . You’ll find valuable insights and information about your Kubernetes environment.

Datadog Events

Install MySQL Dashboard

To access the MySQL dashboard, go to Integrations and then install the MySQL integration from there. This will allow you to monitor your MySQL databases through Datadog’s dashboard.

Integrations

Deploy MySQL Cluster

Now we are going to deploy MySQL cluster using KubeDB. You’ll need to deploy your MySQL cluster with the same namespace default where Datadog is installed.

Here is the yaml of the MySQL we are going to use:

apiVersion: kubedb.com/v1alpha2
kind: MySQL
metadata:
  name: mysql-cluster-dd
  namespace: default
spec:
  version: "8.0.32"
  replicas: 3
  topology:
    mode: GroupReplication
  storageType: Durable
  storage:
    storageClassName: "standard"
    accessModes:
      - ReadWriteOnce
    resources:
      requests:
        storage: 1Gi
  terminationPolicy: WipeOut
  podTemplate:
    metadata:
      annotations:
        ad.datadoghq.com/mysql.checks: |
          {
            "mysql": {
              "instances": [
                {
                  "server": "%%host%%",
                  "username": "datadog",
                  "password": "admin123"
                }
              ]
            }
          }          
        ad.datadoghq.com/mysql.logs: '[{"source": "mysql", "service": "mysql"}]'

Let’s save this yaml configuration into mysql-cluster-dd.yaml Then create the above MySQL CRD

$ kubectl apply -f mysql-cluster-dd.yaml
mysql.kubedb.com/mysql-cluster-dd created

In this yaml,

  • spec.version field specifies the version of MySQL. Here, we are using MySQL version 8.0.32. You can list the KubeDB supported versions of MySQL by running $ kubectl get mysqlversions command.
  • Another field to notice is the spec.storageType field. This can be Durable or Ephemeral depending on the requirements of the database to be persistent or not.
  • spec.terminationPolicy field is Wipeout means that the database will be deleted without restrictions. It can also be “Halt”, “Delete” and “DoNotTerminate”. Learn more about Termination Policy .
  • spec.podTemplate.metadata.annotations field specifes Autodiscovery Integrations Templates as pod annotations on your application container. Learn more about Autodiscovery Template Variables .

Note: To align with the configurations specified in our annotations, it is essential to create a MySQL user with the username datadog and the password admin123. You can change these fields to your preference.

Once everything handled correctly and the MySQL object is deployed, you will see that the following are created:

$ kubectl get all -n default -l=app.kubernetes.io/instance=mysql-cluster-dd

NAME                                         READY   STATUS    RESTARTS   AGE
pod/mysql-cluster-dd-0                       2/2     Running   0          3m
pod/mysql-cluster-dd-1                       2/2     Running   0          2m7s
pod/mysql-cluster-dd-2                       2/2     Running   0          2m11s

NAME                                                 TYPE        CLUSTER-IP     EXTERNAL-IP   PORT(S)             AGE
service/mysql-cluster-dd                             ClusterIP   10.48.14.254   <none>        3306/TCP            3m
service/mysql-cluster-dd-pods                        ClusterIP   None           <none>        3306/TCP            2m7s
service/mysql-cluster-dd-standby                     ClusterIP   10.48.4.155    <none>        3306/TCP            2m11s

NAME                                READY   AGE
statefulset.apps/mysql-cluster-dd   3/3     3m

NAME                                                  TYPE               VERSION   AGE
appbinding.appcatalog.appscode.com/mysql-cluster-dd   kubedb.com/mysql   8.0.32    3m

Let’s check if the database is ready to use,

$ kubectl get mysql -n default mysql-cluster-dd
NAME               VERSION   STATUS   AGE
mysql-cluster-dd   8.0.32    Ready    5m

We have successfully deployed MySQL in GKE with Datadog. Now we can exec into the container to use the database.

Accessing Database Through CLI

To access the database through CLI, we have to get the credentials to access. KubeDB will create Secret and Service for the database mysql-cluster-dd that we have deployed. Let’s check them using the following commands,

$ kubectl get secret -n default -l=app.kubernetes.io/instance=mysql-cluster-dd
NAME                    TYPE                       DATA   AGE
mysql-cluster-dd-auth   kubernetes.io/basic-auth   2      4m

$ kubectl get service -n default -l=app.kubernetes.io/instance=mysql-cluster-dd
NAME                       TYPE        CLUSTER-IP     EXTERNAL-IP   PORT(S)    AGE
mysql-cluster-dd           ClusterIP   10.48.14.254   <none>        3306/TCP   4m
mysql-cluster-dd-pods      ClusterIP   None           <none>        3306/TCP   4m
mysql-cluster-dd-standby   ClusterIP   10.48.4.155    <none>        3306/TCP   4m

Now, we are going to use mysql-cluster-dd-auth to get the credentials.

$ kubectl get secrets -n default mysql-cluster-dd-auth -o jsonpath='{.data.username}' | base64 -d
root

$ kubectl get secrets -n default mysql-cluster-dd-auth -o jsonpath='{.data.password}' | base64 -d
EqsDcS6Meym91PpW

Grant Permission to Datadog Agent

In this section, we’ll create a MySQL user with the username datadog and the password admin123 as defined in mysql-cluster-dd.yaml. Additionally, we’ll provide the user to have the necessary permissions to scrape metrics.

$ kubectl exec -it mysql-cluster-dd-0 -n default -c mysql -- bash
bash-4.4# mysql --user=root --password='EqsDcS6Meym91PpW'

Welcome to the MySQL monitor.  Commands end with ; or \g.
Type 'help;' or '\h' for help. Type '\c' to clear the current input statement.

mysql> CREATE USER 'datadog'@'%' IDENTIFIED BY 'admin123';
Query OK, 0 rows affected (0.03 sec)

mysql> GRANT REPLICATION CLIENT ON *.* TO 'datadog'@'%';
Query OK, 0 rows affected (0.01 sec)

mysql> GRANT PROCESS ON *.* TO 'datadog'@'%';
Query OK, 0 rows affected (0.00 sec)

mysql> GRANT SELECT ON performance_schema.* TO 'datadog'@'%';
Query OK, 0 rows affected (0.01 sec)

mysql> exit
Bye

Accessing MySQL Dashboards

To access the monitoring dashboards in the Datadog UI, navigate to the Dashboards section in your Datadog account’s main menu. From the dropdown menu, select Dashboards List, and you’ll find MySQL - Overview and MySQL. These dashboards provide insights into various aspects of your MySQL database, offering both a high-level summary and more detailed performance metrics for effective monitoring and management. Also, to access MySQL metrics, navigate to the Metrics section and select Summary in the Datadog UI.

Dashboards List

MySQL Overview

MySQL

MySQL Metrics

Insert Sample Data

Let’s insert some sample data into our MySQL database.

$ kubectl exec -it mysql-cluster-dd-0 -n default -c mysql -- bash
bash-4.4# mysql --user=root --password='EqsDcS6Meym91PpW'

Welcome to the MySQL monitor.  Commands end with ; or \g.
Type 'help;' or '\h' for help. Type '\c' to clear the current input statement.

mysql> CREATE DATABASE Music;
Query OK, 1 row affected (0.03 sec)

mysql> CREATE TABLE Music.Artist (id INT(6) UNSIGNED AUTO_INCREMENT PRIMARY KEY, Name VARCHAR(50), Song VARCHAR(50));
Query OK, 0 rows affected, 1 warning (0.04 sec)

mysql> INSERT INTO Music.Artist (Name, Song) VALUES ("John Denver", "Country Roads");
Query OK, 1 row affected (0.01 sec)

mysql> SELECT * FROM Music.Artist;
+----+-------------+---------------+
| id | Name        | Song          |
+----+-------------+---------------+
|  1 | John Denver | Country Roads |
+----+-------------+---------------+
1 row in set (0.00 sec)

mysql> exit
Bye

We’ve successfully inserted some sample data to our database. More information about Run & Manage MySQL on Kubernetes can be found in MySQL Kubernetes

Following the insertion of sample data into our MySQL database, we can monitor any resultant changes in the Datadog UI. Go to the MySQL and MySQL - Overview dashboards to observe any updates in performance metrics and insights for our MySQL database.

MySQL Overview After

MySQL After

Conclusion

In this article, we’ve explored the process of monitoring MySQL with Datadog in the Google Kubernetes Engine (GKE) using KubeDB. Our aim was to provide insights into efficiently managing and analyzing MySQL performance within a Kubernetes environment. We’ve explored into the MySQL configuration, data insertion, and monitoring aspects. This is just the beginning of our journey in exploring the dynamic relationship between MySQL, Datadog, and Kubernetes. We have more articles and resources in the pipeline, all geared toward enhancing your understanding of these technologies and their effective integration. To stay updated and informed, be sure to follow our website for upcoming articles and insights.

If you want to learn more about Production-Grade MySQL you can have a look into that playlist below:

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More about MySQL on Kubernetes

If you have found a bug with KubeDB or want to request for new features, please file an issue .


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